NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE117633 Query DataSets for GSE117633
Status Public on Jul 31, 2024
Title RNA-binding protein A1CF modulates plasma triglyceride levels through posttranscriptional regulation of stress-induced VLDL secretion
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary A recent human exome-chip study on plasma lipids identified a missense mutation in the 3 A1CF (APOBEC1 complementation factor) gene that associates with elevated TG levels, but how A1CF, 4 an RNA binding protein, influences plasma TG is unknown.
 
Overall design RNA-binding protein A1CF modulates plasma triglyceride levels through posttranscriptional regulation of stress-induced VLDL secretion
 
Contributor(s) Lin J, Conlon DM, Wang X, Nostrand EV, Park Y, Strong A, Rdmanesh B, Kathiresan S, Barash Y, Rader DJ, Yeo G, Musunuru K
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 25, 2018
Last update date Jul 31, 2024
Contact name Gene Yeo
E-mail(s) geneyeo@ucsd.edu
Organization name UCSD
Street address 2880 Torrey Pines Scenic Dr. Room 3805/Yeo Lab
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (4)
GSM3305347 COLLAB6and7_01
GSM3305348 COLLAB6and7_01_INPUT
GSM3305349 COLLAB6and7_02
Relations
BioProject PRJNA482762
SRA SRP155155

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117633_COLLAB6and7.01v02.IDR.out.0102merged.bed.gz 74.9 Kb (ftp)(http) BED
GSE117633_COLLAB6and7_01.basedon_COLLAB6and7_01.peaks.l2inputnormnew.bed.compressed.bed.gz 1.4 Mb (ftp)(http) BED
GSE117633_COLLAB6and7_02.basedon_COLLAB6and7_02.peaks.l2inputnormnew.bed.compressed.bed.gz 982.4 Kb (ftp)(http) BED
GSE117633_RAW.tar 105.5 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap