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Series GSE117559 Query DataSets for GSE117559
Status Public on Jul 24, 2018
Title RNA-sequencing of liver samples derived from offspring sired by males chronically exposed to alcohol prior to conception
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Using an established mouse model of chronic exposure, previous work by our group had linked preconception paternal alcohol use to sex-specific patterns of fetal growth restriction and placental dysfunction. The goal of the present study was to investigate the long-term impact chronic preconception paternal alcohol exposure has on offspring growth and metabolic programming. In the male offspring, we observed increases in both the expression of genes within the pro-fibrotic TGF-ß signaling pathway as well as total levels of cellular hydroxyproline within the liver. Further, we identified suppressed cytokine profiles, which could be linked to the up-regulation of genes in the LiverX/RetinoidX/FarnesoidX Receptor pathways.
 
Overall design Postnatal day 90 male mice were provided access to either a solution of 10% (w⁄v) alcohol and 0.066% (w⁄v) Sweet ‘N Low (experimental) or 0.066% (w⁄v) Sweet ‘N Low alone (control) for four hours a day. Once consistent patterns of drinking were established, males were maintained on this protocol for a period of 70 days, which corresponds to the length of approximately two complete spermatogenic cycles. Once the 70-day milestone was surpassed, males were mated to unexposed dams and the offspring evaluated for growth.
 
Contributor(s) Golding M, Chang RC
Citation(s) 30670059
Submission date Jul 23, 2018
Last update date Mar 19, 2019
Contact name MICHAEL C. GOLDING
E-mail(s) mgolding@cvm.tamu.edu
Phone 979-862-1332
Organization name Texas A&M UNiversity
Department Physiology
Lab Golding Lab
Street address 4466 TAMU
City College Station
State/province Texas
ZIP/Postal code 77843-4466
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (6)
GSM3303904 MCAL1
GSM3303905 MCAL2
GSM3303906 MCAL3
Relations
BioProject PRJNA482462
SRA SRP154937

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117559_gene_exp.diff.gz 779.4 Kb (ftp)(http) DIFF
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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