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| Status |
Public on Aug 28, 2018 |
| Title |
RNA-sequencing of primary intestinal epithelial cells from wild-type mice |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
This dataset consists of RNA-sequencing of isolated mouse intestinal epithelial cells. Intestinal epithelial cells were isolated from C57BL/6 wild-type mice in our SPF facility at 4 weeks and 8 weeks of age. The goal of this study was to understand the patterns of gene expression in these cells under homeostatic conditions.
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| Overall design |
Intestinal epithelial cells were isolated from the small intestines and colons of wild-type mice and RNA was prepared for RNA-sequencing. For each tissue, IECs were isolated from 2 mice aged 4 weeks and 2 mice aged 8 weeks.
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| Contributor(s) |
Deguine J, Price A |
| Citation(s) |
30170812 |
| |
| Submission date |
Jul 23, 2018 |
| Last update date |
Mar 19, 2019 |
| Contact name |
Gregory Barton |
| Organization name |
UC Berkeley
|
| Department |
Molecular and Cell Biology
|
| Street address |
142 LSA #3200
|
| City |
Berkeley |
| State/province |
CA |
| ZIP/Postal code |
94720 |
| Country |
USA |
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| Platforms (1) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA482383 |
| SRA |
SRP154882 |
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