NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE117517 Query DataSets for GSE117517
Status Public on Jul 20, 2020
Title RNA-seq results in adipose tissues of fat-specific Mecp2 knockout mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Fat-specific knockout of Mecp2 results in downregulation of adipogenesis genes and upregulation of theromgenesis genes
 
Overall design Fat-specific Mecp2 knockout male mice (Mecp2 Adi KO) and their age-, sex- matched control mice were fed with normal chow diet (NCD) and maintained in standard housing conditions. For each experimental group, two biological replicates of RNA samples were sent for RNA-seq. Each sample consists of a pool of RNAs extracted from inguinal adipose tissue or brown adipose tissue of 3 different mice.
 
Contributor(s) Liu C, Zheng L, Huang K
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 23, 2018
Last update date Jul 20, 2020
Contact name Chengyu Liu
E-mail(s) 2123236@qq.com
Phone +86 18627760685
Organization name Huazhong University of Science and Technology
Street address No.13, Hangkong Road
City Wuhan
ZIP/Postal code 430030
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (8)
GSM3302149 WT (iWAT) rep1
GSM3302150 WT (iWAT) rep2
GSM3302151 KO (iWAT) rep1
Relations
BioProject PRJNA482389
SRA SRP154883

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117517_BAT_KO.xls.gz 392.6 Kb (ftp)(http) XLS
GSE117517_BAT_WT.xls.gz 391.9 Kb (ftp)(http) XLS
GSE117517_iWAT_KO.xls.gz 432.6 Kb (ftp)(http) XLS
GSE117517_iWAT_WT.xls.gz 428.5 Kb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap