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Series GSE117228 Query DataSets for GSE117228
Status Public on Mar 01, 2019
Title Single cell RNA sequencing of primary-isolated erythroid progenitors [BFUE, CFUE, intermediates]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Single cell RNA sequencing of freshly isolated mouse burst forming unit-erythroid (BFU-E) , colony forming unit-erythroid (CFU-E), and intermediate stages of erythroid development cells.
 
Overall design One 96 well plate with 24 BFU-E, 24 CFU-E, 24 cells with 25-35% expression of CD71/CD24, and 24 cells with 50-60% expression of CD71/CD24.
 
Contributor(s) Li H, Barrasa I
Citation(s) 30827895
Submission date Jul 17, 2018
Last update date May 31, 2019
Contact name Hojun Li
Organization name Whitehead Institute for Biomedical Research
Lab Lodish
Street address 455 Main Street
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (96)
GSM3288604 BFUE-A1
GSM3288605 BFUE-A2
GSM3288606 BFUE-A3
This SubSeries is part of SuperSeries:
GSE117233 Single cell RNA sequencing of primary-isolated erythroid progenitors
Relations
BioProject PRJNA481512
SRA SRP154147

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117228_BFUE_CFUE_andInterm.counts.txt.gz 1.9 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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