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Series GSE117189 Query DataSets for GSE117189
Status Public on Feb 25, 2019
Title Fisetin induces autophagy in pancreatic cancer cells via endoplasmic reticulum stress- and mitochondrial stress-dependent pathways
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Pancreatic cancer is one of the most aggressive tumors and has poor survival rates. Fisetin, a natural flavonoid, was recently reported to have antitumor effects in various cancer models. Autophagy is a conserved catabolic process that maintains cellular homoeostasis in response to stress, and together with apoptosis, determines cell fate. Herein, we examined the effect of fisetin on pancreatic cancer. We reveal that fisetin inhibits Panc-1 cell proliferation in vivo and in vitro. We found that AMPK-dependent autophagy was enhanced after fisetin treatment.However RNA-seq analysis revealed that the unfolded protein response, which is activated by ER stress, was enriched. We also found that there may be crosstalk between the AMPK- and p8-dependent pathways.
 
Overall design Total mRNA profiles of human pancreatic cancer Panc-1 cells with or without treatment of Fisetin, were generated by deep sequencing, in triplicate.
 
Contributor(s) Jia S, Xu X, Zhou S, Chen Y, Ding G, Cao L
Citation(s) 30760707, 37743465
Submission date Jul 16, 2018
Last update date Oct 03, 2023
Contact name Xiao Dong Xu
E-mail(s) xxd94@foxmail.com
Phone 15757119342
Organization name Department of General Surgery,Sir Run Run Shaw Hospital,School of Medicine,Zhejiang University
Street address Administrative Building,3 East Qingchun Road, Hangzhou, Zhejiang, China.
City Hangzhou
State/province Zhejiang province
ZIP/Postal code 310000
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (6)
GSM3273178 Fis1
GSM3273179 Fis2
GSM3273180 Fis3
Relations
BioProject PRJNA481372
SRA SRP153992

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117189_RAW.tar 1.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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