|
| Status |
Public on Jul 14, 2018 |
| Title |
The Transcription factor Zeb2 ia required to maintain tissue-specific identities of macrophages [single-cell RNA-seq] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Microarray, Bulk RNA Sequencing and Single cell RNA Sequencing of different murine tissue-resident macrophage populations to assess role of Zeb2 and LXRa
|
| |
|
| Overall design |
SIngle cell RNA Seq = WT or Zeb2 KO macrophages from different tissues performed with the 10X Genomics platform. KOs were compared with WT controls and DE genes compared across tissues.
|
| |
|
| Contributor(s) |
Scott CL, T'Jonck W, Martens L, De Pricjk S, Vandamme N, Saeys Y, Guilliams M |
| Citation(s) |
30076102 |
| |
| Submission date |
Jul 13, 2018 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Liesbet Martens |
| E-mail(s) |
liesbet.martens@irc.vib-ugent.be
|
| Organization name |
VIB-University of Ghent
|
| Department |
VIB Inflammation Research Center
|
| Street address |
Technologiepark 927
|
| City |
Zwijnaarde |
| ZIP/Postal code |
9052 |
| Country |
Belgium |
| |
|
| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
|
| Samples (12)
|
|
| This SubSeries is part of SuperSeries: |
| GSE117081 |
The Transcription factor Zeb2 ia required to maintain tissue-specific identities of macrophages |
|
| Relations |
| BioProject |
PRJNA481017 |
| SRA |
SRP153376 |
Less...
More...