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Series GSE11691 Query DataSets for GSE11691
Status Public on Dec 22, 2008
Title Euctopic and ectopic human endometrium (endometriosis)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The pathophysiology of endometriotic lesion development remains unclear but involves a complex interaction between ectopic endometrium and host peritoneal tissues. We hypothesised that disruption of this interaction was likely to suppress endometriotic lesion formation. We hoped to delineate the molecular and cellular dialogue between ectopic human endometrium and peritoneal tissues in nude mice, as a first step towards testing this hypothesis. Human endometrium was xenografted into nude mice and the resulting lesions were analysed using microarrays. A novel technique was developed that unambiguously determined whether RNA transcripts identified by the microarray analyses originated from human cells (endometrium) or mouse cells (stroma). Four key pathways (ubiquitin/proteosome, inflammation, tissue remodelling/repair and ras-mediated oncogenesis) were revealed, that demonstrated communication between host stromal cells and ectopic endometrium.

Keywords: Disease state analysis
 
Overall design Paired samples of eutopic and ectopic endometrium from 9 individual women were collected and the transcript profiles compared.
 
Contributor(s) Charnock-Jones DS
Citation(s) 18688027
Submission date Jun 05, 2008
Last update date Aug 10, 2018
Contact name D. Stephen Charnock-Jones
E-mail(s) dscj1@cam.ac.uk
Organization name University of Cambridge
Department Obstetrics and Gynaecology
Street address The Rosie Hospital
City Cambridge
ZIP/Postal code CB2 0SW
Country United Kingdom
 
Platforms (1)
GPL96 [HG-U133A] Affymetrix Human Genome U133A Array
Samples (18)
GSM296875 Endometrium-3
GSM296876 Endometrium-5
GSM296877 Endometrium-6
This SubSeries is part of SuperSeries:
GSE11769 Analysis of ectopic human endometrium and peritoneal tissues in nude mice
Relations
BioProject PRJNA109165

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE11691_RAW.tar 60.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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