NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE116816 Query DataSets for GSE116816
Status Public on Oct 28, 2018
Title LATS1 and LATS2 suppress breast cancer progression by maintaining cell identity and metabolic state [human]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Deregulated activity of the LATS tumor suppressors has broad implications on cellular and tissue homeostasis. We examined the consequences of downregulation of either LATS1 or LATS2 in breast cancer. Consistent with their proposed tumor suppressive roles, expression of both paralogs is significantly downregulated in human breast cancer, and loss of either paralog accelerated mammary tumorigenesis in mice. However, each paralog had a distinct impact on breast cancer. Thus, LATS2 depletion in luminal B tumors resulted in metabolic rewiring, with increased glycolysis and reduced PPARg signaling. Furthermore, pharmacological activation of PPARg elicited LATS2-dependent death in luminal B-derived cells. In contrast, LATS1 depletion augmented cancer cell plasticity, skewing luminal B tumors towards increased expression of basal-like features, in association with increased resistance to hormone therapy. Hence, these two closely related paralogs play distinct roles in protection against breast cancer; tumors with reduced expression of either LATS1 or LATS2 may rewire signaling networks differently and thus respond differently to anti-cancer treatments.
 
Overall design RNA from ZR75-1 and MCF7 transfected with siControl, siLATS1 or siLATS2 oligonucleotides was isolated and subjected to RNA-seq as above. For ZR75-1, three independent biological replicates were used. For MCF7, two independent biological replicates were used. ZR75-1 were transfected with either GFP only, GFP-LATS1 or GFP-LATS2. GFP-positive cells were sorted by FACS 24h following transfection (~80000 cells per sample). Two independent replicates were used.
 
Contributor(s) Furth N, Aylon Y, Leshkowitz D, Bakaev D, Stelzer G, Oren M
Citation(s) 30456386
Submission date Jul 09, 2018
Last update date Mar 27, 2019
Contact name Dena Leshkowitz
E-mail(s) dena.leshkowitz@weizmann.ac.il
Organization name Weizmann Institute of Science
Department Bioinformatics Unit, Life Sciences Core Facilities
Street address P.O.B. 26
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (21)
GSM3262220 KWZ7
GSM3262221 KWZ8
GSM3262222 KWZ9
This SubSeries is part of SuperSeries:
GSE116818 LATS1 and LATS2 suppress breast cancer progression by maintaining cell identity and metabolic state
Relations
BioProject PRJNA480289
SRA SRP152870

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116816_MCF7.xlsx 653.4 Kb (ftp)(http) XLSX
GSE116816_ZR75.xlsx 884.6 Kb (ftp)(http) XLSX
GSE116816_ZR75_OE.xlsx 662.8 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap