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| Status |
Public on Nov 28, 2018 |
| Title |
Ikzf2/helios mutant cochlear RNA-seq analysis |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Given the potential role of the helios transcription factor in postnatal outer hair cell gene regulation indicated by our RiboTag translatome analyses, our next goal was to identify and validate genes that are regulated by helios in outer hair cells by performing RNA-seq on P8 cello mutant animals compared to wild-type littermates.
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| Overall design |
Difference in cochlear gene expression between wild-type Ikzf2+/+ animals and mutant Ikzf2cello/cello littermates was analyzed by RNA-seq in biological duplicates.
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| Contributor(s) |
Chessum L, Matern MS, Milon B, Bowl M, Hertzano R, Elkon R, Song Y |
| Citation(s) |
30464345 |
| |
| Submission date |
Jul 06, 2018 |
| Last update date |
Mar 19, 2019 |
| Contact name |
yang song |
| E-mail(s) |
ysong@som.umaryland.edu
|
| Organization name |
University of Maryland in Baltimore
|
| Department |
Department: Institute for Genome Sciences
|
| Street address |
HSF-3, 3rd Floor; 670 W Baltimore St.
|
| City |
Baltimore |
| State/province |
MD |
| ZIP/Postal code |
21201 |
| Country |
USA |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA479955 |
| SRA |
SRP152409 |
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