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Series GSE116690 Query DataSets for GSE116690
Status Public on Jul 06, 2018
Title Gene expression analysis of E16.5 Stk11-sufficient control and Sk11-/- lungs
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Functional properties of mucosal surfaces are dependent on establishing the correct proportions of specialized epithelial cell types. In the mammalian airway, the proportions of ciliated and secretory cells types are tightly regulated to ensure efficient mucociliary clearance. Ciliated cells are one of the first mature cell types to be specified by differentiation of multipotent endodermal progenitors of the developing lung and can be replaced postnatally by differentiation of secretory progenitors. In each case, cell cycle exit is a necessary, early step that precedes differentiation. However, the relationship between cell cycle exit and cell fate determination is poorly understood. We show that the serine-threonine kinase Stk11 controls the cell cycle exit in airway stem/progenitor cells via phosphorylation and activation of the AMPK-related kinase Mark3, which directly suppresses Erk1/2 mediated Rb inactivation. Our study demonstrates that Stk11-dependent cell cycle exit accounts for the normal program of ciliated cell differentiation in developing and postnatal airways.
 
Overall design Examination of gene expression in two E16.5 Stk11-sufficient control lungs, examination of gene expression in two E16.5 Stk11-/- lungs.
 
Contributor(s) Chu Q, Huang H, Tang N
Citation(s) 31636950
Submission date Jul 05, 2018
Last update date Oct 29, 2019
Contact name huanwei huang
E-mail(s) hhw2436@gmail.com
Organization name NIBS
Street address 7 Science Park Rd., ZGC life science park
City Beijing
ZIP/Postal code 102206
Country China
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (4)
GSM3258521 E16.5_control_rep1
GSM3258522 E16.5_control_rep2
GSM3258523 E16.5_Shh-Stk11FF_rep1
Relations
BioProject PRJNA479877
SRA SRP152348

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Supplementary file Size Download File type/resource
GSE116690_expression.FPKM.txt.gz 340.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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