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Series GSE116501 Query DataSets for GSE116501
Status Public on Jul 03, 2018
Title Temporal activation of NR5A2 and RARγ induce functional human naïve pluripotent state via modulating TGFβ pathway
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Rejuvenated primed human pluripotent stem cells, naïve cells, are accessible through the manipulating transcription factors, singaling pathways or a combination of both. However, there is a notable challenge in the functions of naïve hPSCs. Here, we show that the brief treatment with two chemical agonists (2a) of nuclear receptors NR5A2 and RARγ along with 2i and lif (2a2iL) is sufficient to induce naive pluripotency during the reprogramming of fibroblasts and pre-established hPSCs as well as the generation of new cell lines from preimplantation embryos. These cells manifested global naive-specific critera especially the contribution into the human-mouse chimeras. We demonstrated that TGF-β pathway activity is potentially critical for induction and maintenance of 2a2iL naive hPSCs. Consequently, transient activation of TGF-β resulted in generation of naive hPSCs in 2iL condition. These results represent a naive pluripotent state which is in a top point of developmental potential equivalent with preimplantation human embryo.
 
Overall design Primed and naïve hESCs mRNA profiling in two cell lines.
 
Contributor(s) Taei A, Kiani T, Taghizadeh Z, Moradi S, Samadian A, Mollamohammadi S, Sharifi-Zarchi A, Guenther S, Akhlaghpour A, Asgari B, Najar-Asl M, Karamzadeh R, Braun T, Seyedeh-Nafiseh H, Baharvand H
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Submission date Jul 02, 2018
Last update date Mar 26, 2019
Contact name Ali Sharifi-Zarchi
E-mail(s) asharifiz@gmail.com
Organization name Royan Institute for Stem Cell Biology and Technology
Street address Royan Institute, Bani Hashem Sq.
City Tehran
ZIP/Postal code P.O. Box: 16635-148
Country Iran
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM3241139 nRH6_1
GSM3241140 nRH6_2
GSM3241141 nRH5_1
Relations
BioProject PRJNA478855
SRA SRP151759

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116501_gene_counts_unnormalized.txt.gz 3.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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