NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE116432 Query DataSets for GSE116432
Status Public on Sep 02, 2020
Title Glucocorticoids enhance the anti-leukemic activity of FLT3 inhibitors in FLT3 mutant acute myeloid leukemia
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Utilizing genome wide transcriptome analysis and drug screen we demonstrate that upregulation of inflammatory pathways is a key mechanism of drug tolerance to FLT3 targeted inhibitors in AML
 
Overall design Performed RNA-seq after isolating cells that survive treatment with DMSO or quizartinib for 48h or after recovery in drug free media for 13 or 30 days. Another set of RNA-seq was performed using cells that survive treatment with DMSO, dexamethasone, quizartinib or the combination of quizartinib and dexamethasone for 48h or 5 days(in the case of combination tretment for 5days quizartinib was kept for 5 days but dexemethasone was added on Day 3).
 
Contributor(s) Gebru MT, Wang HG
Citation(s) 32396937
Submission date Jun 28, 2018
Last update date Sep 02, 2020
Contact name Melat T Gebru
E-mail(s) melattata17@gmail.com
Phone 7175269259
Organization name Penn State University
Department Pediatrics
Lab Hong-Gang Wang
Street address 95A University Manor East
City Hershey
State/province PA
ZIP/Postal code 17033
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (26)
GSM3231536 Untreated (MO7) Rep1
GSM3231537 Untreated (MO8) Rep2
GSM3231538 DTPs-48h (MO9) Rep1
Relations
BioProject PRJNA478462
SRA SRP151611

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116432_DMSO-_48h-_1_2_3.xlsx 651.2 Kb (ftp)(http) XLSX
GSE116432_Dex-48h-_1_2_3.xlsx 652.5 Kb (ftp)(http) XLSX
GSE116432_Quiz-48h-_1_2_3.xlsx 647.4 Kb (ftp)(http) XLSX
GSE116432_Quiz-5d-_1_2_3.xlsx 645.3 Kb (ftp)(http) XLSX
GSE116432_Quiz_+_Dex_-48h-_1_2_3.xlsx 651.0 Kb (ftp)(http) XLSX
GSE116432_Quiz_+_Dex_-5d-_1_2_3.xlsx 648.6 Kb (ftp)(http) XLSX
GSE116432_RAW.tar 26.1 Mb (http)(custom) TAR (of XLSX)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap