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Series GSE116279 Query DataSets for GSE116279
Status Public on Feb 28, 2019
Title Dynamic BAF chromatin remodeling complex subunit inclusion promotes temporally distinct gene expression programs in cardiogenesis [RNA-Seq III]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We compared differential gene expression between WT and BAF60c KO and between WT and BAF170 KO cardiac precursors and cardiomyocytes
 
Overall design 18 samples
 
Contributor(s) Bruneau B, Hota S
Citation(s) 30814119
Submission date Jun 26, 2018
Last update date May 30, 2019
Contact name Benoit Bruneau
E-mail(s) benoit.bruneau@gladstone.ucsf.edu
Organization name Gladstone Institute of Cardiovascular Disease
Street address 1650 Owens Street
City San Francisco
State/province CA
ZIP/Postal code 94158
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (18)
GSM3223731 WT_CP Rep1
GSM3223732 WT_CP Rep2
GSM3223733 WT_CP Rep3
This SubSeries is part of SuperSeries:
GSE116296 Dynamic BAF chromatin remodeling complex subunit inclusion promotes temporally distinct gene expression programs in cardiogenesis
Relations
BioProject PRJNA478054
SRA SRP151456

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116279_RAW.tar 4.3 Gb (http)(custom) TAR (of BW)
Raw data are available in SRA
Processed data provided as supplementary file

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