|
| Status |
Public on Apr 29, 2019 |
| Title |
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer |
| Organism |
Mus musculus |
| Experiment type |
Methylation profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
31028100 |
| |
| Submission date |
Jun 25, 2018 |
| Last update date |
May 29, 2019 |
| Contact name |
Anjana Rao |
| E-mail(s) |
arao@lji.org
|
| Organization name |
La Jolla Institute for Allergy and Immunology
|
| Department |
Signaling and Gene Expression
|
| Lab |
Anjana Rao
|
| Street address |
9420 Athena Cir
|
| City |
La Jolla |
| State/province |
California |
| ZIP/Postal code |
92037 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL16417 |
Illumina MiSeq (Mus musculus) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (83)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE116201 |
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer [CMS-IP] |
| GSE116202 |
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer [BS-seq] |
| GSE116203 |
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer [ATAC-seq] |
| GSE116204 |
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer [RNA-seq] |
| GSE116205 |
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer [BATF_ChIP-seq] |
| GSE116206 |
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer [H3K27ac_ChIP-seq] |
| GSE116207 |
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer [Tet2-ChIP-seq] |
|
| Relations |
| BioProject |
PRJNA477772 |
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