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| Status |
Public on Jun 15, 2020 |
| Title |
Transcriptome and 5mC/5hmC of Trophoblast Stem Cells [RNA-seq] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq of WT, Tet2-het and Tet2-KO mTSCs in stem-state, RNA-seq of WT and Tet2-KO mTSCs in vitro differentiation, (h)MeDIP of WT and Tet2-KO mTSCs in stem-state
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| |
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| Overall design |
RNA-seq and (h)MeDIP-seq profiles , generated by deep sequencing in diplicate, using HiSeq 2500. Paired-end 125-bp sequencing was applied.
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| |
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| Contributor(s) |
Zhang L, Xiu W |
| Citation missing |
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| |
| Submission date |
Jun 22, 2018 |
| Last update date |
Jun 16, 2020 |
| Contact name |
Shaorong Gao |
| E-mail(s) |
gaoshaorong@tongji.edu.cn
|
| Organization name |
Tongji University
|
| Street address |
Siping Road NO.1239
|
| City |
Shanghai |
| ZIP/Postal code |
200092 |
| Country |
China |
| |
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| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (4)
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| This SubSeries is part of SuperSeries: |
| GSE116186 |
Transcriptome and 5mC/5hmC of Trophoblast Stem Cells |
|
| Relations |
| BioProject |
PRJNA477561 |
| SRA |
SRP151157 |
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