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Series GSE116115 Query DataSets for GSE116115
Status Public on May 16, 2019
Title Identification of mesenchymal progenitors in the early limb bud
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Identification of progenitors populations through FACS in the early limb buds (E10.5 and E11.5) followed by RNA-seq. These populations showed distinct signalling pathways, that were confirmed in vitro and in vivo.
 
Overall design 5 different populations were analysed in triplicates.
 
Contributor(s) Gullotta F, Reinhardt R, Ivanek R, Zeller R
Citation(s) 31076486
Submission date Jun 21, 2018
Last update date Nov 17, 2021
Contact name DBM Bioinformatics Core Facility
Phone +41612073541
Organization name University of Basel
Department Departement of Biomedicine
Street address Hebelstrasse 20
City Basel
State/province BS
ZIP/Postal code 4053
Country Switzerland
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (14)
GSM3209107 OCP_rep1
GSM3209108 OCP_rep2
GSM3209109 OCP_rep3
Relations
BioProject PRJNA477311
SRA SRP151028

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116115_counts.txt.gz 522.6 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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