|
| Status |
Public on Jun 13, 2018 |
| Title |
Histone deacetylase inhibitors in alveolar rhabdomyosarcoma |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Multiple histone deacetylase inhibitors were tested on multiple alveolar rhabdomyosarcoma cell lines and multiple patient-derived xenograft models of alveolar rhabdomyosarcoma
|
| |
|
| Overall design |
Alveolar rhabdomyosarcoma cell lines were treated with various histone deacetylase inhibitors or with vehicle. Post experiment cells were snap frozen and had RNA isolated from cell pellets. Isolated RNA was sequenced and quantified
|
| |
|
| Contributor(s) |
Berlow NE, Keller C, Bharathy N |
| Citation(s) |
31113472 |
| |
| Submission date |
Jun 12, 2018 |
| Last update date |
Jun 17, 2019 |
| Contact name |
Noah Berlow |
| E-mail(s) |
noah@cc-tdi.org
|
| Organization name |
CC-TDI
|
| Street address |
12655 SW Beaverdam Rd
|
| City |
Beaverton |
| ZIP/Postal code |
97005 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (30)
|
|
| Relations |
| BioProject |
PRJNA475783 |
| SRA |
SRP150362 |
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