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Series GSE115608 Query DataSets for GSE115608
Status Public on Jun 12, 2018
Title Transcriptional profiling of Ishikawa cells treated with H3B-5942, E2, or standard of care compounds
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The objective of this experiment was to determine the affect of H3B-5942 treatment on global gene expression in an estrogen-deprived setting (agonist mode) and to compare to treatment with a saturated analog of H3B-5942, GDC-0810, and standard of care agents tamoxifen and fulvestrant.
 
Overall design 7 conditions were assessed (H3B-5924, H3B-9224, E2, fulvestrant, tamoxifen, GDC-810, and DMSO as negative control). Compounds were added at 2 concentrations (3nM and 30nM). Two samples of each condition were collected.
 
Contributor(s) Puyang X, Furman C, Wu ZJ
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 11, 2018
Last update date Mar 21, 2019
Contact name Zhenhua Wu
E-mail(s) zhenhuawu75@gmail.com
Phone 6179592279
Organization name H3 Biomedicine
Street address 300 Technology Square floor 5
City Cambridge
State/province MA
ZIP/Postal code 02139
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (26)
GSM3184882 DMSO.DMSO.rep1
GSM3184883 DMSO.DMSO.rep2
GSM3184884 E2.3nM.rep1
This SubSeries is part of SuperSeries:
GSE115611 Discovery of Selective Estrogen Receptor Covalent Antagonists (SERCAs) for the treatment of ERa(WT) and ERa(MUT) breast cancer.
Relations
BioProject PRJNA475565
SRA SRP150241

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115608_RAW.tar 16.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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