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Series GSE115550 Query DataSets for GSE115550
Status Public on Aug 31, 2018
Title Spatially Constrained Tandem Bromodomain Inhibition Bolsters Sustained Repression of BRD4 Transcriptional Activity for TNBC Cell Growth
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We performed RNA-seq of MDA-MB-231 cells that were treated with MS645 or JQ1 at 50 nM and 500 nM in an effort to understand how MS645 exerts such a profound cell growth inhibition on cancer cells.
 
Overall design MDA-MB-231 cells were treated with DMSO and different concentrations of JQ1 and MS645 for 18 hrs to compare the compounds' effect in transcriptional regulation.
 
Contributor(s) Ren C, Zhou M
Citation(s) 30012592
Submission date Jun 10, 2018
Last update date May 17, 2019
Contact name MING-MING ZHOU
E-mail(s) ming-ming.zhou@mssm.edu
Phone 212-659-8652
Organization name Icahn School of Medicine at Mount Sinai
Street address 1425 madison ave
City new york
State/province NY
ZIP/Postal code 10029
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (15)
GSM3181856 DMSO_rep0
GSM3181857 JQ1_50_rep0
GSM3181858 JQ1_500_rep0
Relations
BioProject PRJNA475425
SRA SRP150159

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115550_HTSeq_Sample_combine.txt.gz 519.7 Kb (ftp)(http) TXT
GSE115550_RAW.tar 748.3 Mb (http)(custom) TAR (of TDF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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