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Series GSE115528 Query DataSets for GSE115528
Status Public on Jun 09, 2018
Title Time resolved transcriptome of isolated biofilm cells compared with planktonic cells
Organism Bacillus cereus ATCC 14579
Experiment type Expression profiling by high throughput sequencing
Summary Most differential expression point to attack and defense strategies, comprising structural and metabolic changes.
 
Overall design One strain, four conditions
 
Contributor(s) Caro-Astorga J, Frenzel E, Kuipers OP, Romero D
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 08, 2018
Last update date Jun 11, 2018
Contact name Anne de Jong
E-mail(s) anne.de.jong@rug.nl
Phone +31 50 363 2047
Organization name university of Groningen
Department Molecular Genetics
Street address Nijenborgh 7
City Groningen
ZIP/Postal code 9747 AG
Country Netherlands
 
Platforms (1)
GPL25160 Illumina HiSeq 2000 (Bacillus cereus ATCC 14579)
Samples (14)
GSM3181552 Planktonic 24h [S01_1P1_24]
GSM3181553 Planktonic 24h [S02_1P2_24]
GSM3181554 Biofilm 24h [S03_1B1_24]
Relations
BioProject PRJNA475272
SRA SRP150083

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115528_Processed_data_rpkm.txt.gz 211.6 Kb (ftp)(http) TXT
GSE115528_RAW.tar 1.6 Mb (http)(custom) TAR (of RPKM)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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