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Series GSE115205 Query DataSets for GSE115205
Status Public on Aug 28, 2018
Title Genome wide analysis of SAHA (vorinostat) treatment in human iPSC-derived neurons from Tau A152T patients and controls
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: The goal of this study was to assess gene expression changes upon SAHA treatment in neurons derived from patients with A152T Tau mutation
 
Overall design iPSC derived neurons were treated with SAHA at different dosage for several days
 
Contributor(s) Swarup V, Geschwind DH
Citation(s) 30510257
Submission date Jun 01, 2018
Last update date Mar 21, 2019
Contact name Vivek Swarup
E-mail(s) vswarup@uci.edu
Organization name University of California Irvine
Department Neurobiology and Behavior
Street address 3400 Bio Sci 3
City Irvine
State/province CALIFORNIA
ZIP/Postal code 92697
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (36)
GSM3169280 H1: iPSC-derived Neurons
GSM3169281 H2: iPSC-derived Neurons
GSM3169282 H3: iPSC-derived Neurons
This SubSeries is part of SuperSeries:
GSE90696 Identification of evolutionary conserved gene networks that mediate neurodegenerative dementia
Relations
BioProject PRJNA474111
SRA SRP149532

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115205_RAW.tar 8.7 Mb (http)(custom) TAR (of TXT)
GSE115205_metaData_SampleSheet_SAHA_iPSC_Neurons.txt.gz 9.5 Kb (ftp)(http) TXT
GSE115205_normalizedFPKM_SAHA_iPSC_Neurons.txt.gz 6.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record
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