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Series GSE114759 Query DataSets for GSE114759
Status Public on Aug 13, 2018
Title Transcriptional profiling of cochlear neurons
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In order to characterize the various subpopulations of neurons present in the inner ear, we dissected out the cochleas from wild-type mice, removing non-neuronal populations as possible, then dissociated the tissue to obtain a single cell suspension and profiled these by single cell RNA-Seq.
Overall design This study's goal was to characterize the native populations of murine cochlear neurons. To ensure reproducibility of our findings, neurons from 4 separate mice were profiled.
Contributor(s) Pregernig G, Burns JC, So K, Nguyen M, Palermo A
Citation(s) 30078710
Submission date May 22, 2018
Last update date Mar 08, 2019
Contact name Gabriela Pregernig
Organization name Decibel Therapeutics
Street address 1325 Boylston Street, Suite 500
City Boston
State/province Massachusetts
ZIP/Postal code 02215
Country USA
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM3149743 Cochlea SGNs Mouse 1
GSM3149744 Cochlea SGNs Mouse 2
GSM3149745 Cochlea SGNs Mouse 3
BioProject PRJNA472578
SRA SRP148677

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE114759_RAW.tar 23.3 Mb (http)(custom) TAR (of TXT)
GSE114759_SGNs_metadata.txt.gz 39.4 Kb (ftp)(http) TXT
GSE114759_SGNs_normCounts.txt.gz 134.4 Mb (ftp)(http) TXT
GSE114759_SGNs_rawCounts.txt.gz 21.9 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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