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Series GSE114756 Query DataSets for GSE114756
Status Public on May 09, 2019
Title Reducing astrocyte calcium signaling in vivo alters striatal microcircuits and causes repetitive behavior II
Organism Mus musculus
Experiment type Other
Summary Astrocytes tile the central nervous system, but their functions in neural microcircuits in vivo and their roles in mammalian behavior remain incompletely defined. We used 2-photon laser scanning microscopy (2PLSM), electrophysiology, MINIscopes, RNA-seq and a new genetic approach to characterize the effects of reduced striatal astrocyte Ca2+ signaling in vivo. In wild type mice, reducing striatal astrocyte Ca2+-dependent signaling increased repetitive self-grooming behaviors by altering medium spiny neuron (MSN) activity. The mechanism involved astrocyte-mediated neuromodulation mediated by ambient GABA and was corrected by blocking astrocyte GABA transporter 3 (GAT-3). Furthermore, in a mouse model of Huntington’s disease, dysregulation of GABA and astrocyte Ca2+ signaling accompanied excessive self-grooming, which was relieved by blocking GAT-3. Assessments with RNA-seq revealed astrocyte genes and pathways regulated by Ca2+ signaling in a cell autonomous and non-cell autonomous manner, including Rab11a, a regulator of GAT-3 functional expression. Thus, striatal astrocytes contribute to neuromodulation controlling obsessive-compulsive-like behavior in mice.
 
Overall design Total 16 samples were used in this data set. Whole striata were extraced from 8 adult Aldh1l1-Cre/ERT2 x Ribotag mice: 4 mice received AAV encoding a control protein and 4 mice received AAV encoding a protein that suppresses calcium signals named hPMCA2w/b. After homogenization, RNA was purified from (i) cleared lysate as the input and control, and (ii) astrocyte-specific ribosome-associated RNA precipitated via a hemagglutinin (HA) tag.
 
Contributor(s) Yu X, Taylor AW, Nagai J, Golshani P, Evans CJ, Coppola G, Khakh BS
Citation(s) 30174118
Submission date May 22, 2018
Last update date May 09, 2019
Contact name Giovanni Coppola
E-mail(s) gcoppola@ucla.edu
Phone 310-794-4172
Organization name UCLA
Department Psychiatry and Neurology
Lab Neurogenetics
Street address 1524 Gonda, 695 Charles Young Drive South
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (16)
GSM3149725 Y481_input
GSM3149726 Y481_IP
GSM3149727 Y482_input
This SubSeries is part of SuperSeries:
GSE114757 Reducing astrocyte calcium signaling in vivo alters striatal microcircuits and causes repetitive behavior
Relations
BioProject PRJNA472569
SRA SRP148645

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE114756_RAW.tar 1.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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