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Series GSE114573 Query DataSets for GSE114573
Status Public on Aug 08, 2018
Title Comparison of transcriptome responses to isoxaflutole, quizalofop-p-ethyl and mesotrione in the HepaRG cell line
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We provide here the alterations in gene expression profiles of HepaRG cells, a validated model for cellular steatosis, exposed to three concentration of quizalofop-p-ethyl, isoxaflutole and mesotrione
 
Overall design Differentiated HepaRGTM cells (HPR 116) were purchased from Biopredic International. The cells were kept in the general purpose medium until day 8, when the culture becomes well organized and includes well-delineated trabeculae and many canaliculi-like structures. Three concentrations of the different pesticide active ingredients (quizalofop-p-ethyl, isoxaflutole and mesotrione ) were then tested from day 8 to day 14. In order to ensure coverage of a wide range of potential biological effects, three concentrations of each active principle were tested; a concentration representative of low environmental exposure (0.1 uM), an intermediate concentration (10 uM) and a high concentration (1000 uM).
 
Contributor(s) Mesnage R, Mein CA
Citation(s) 30128299
Submission date May 17, 2018
Last update date Jul 24, 2019
Contact name Robin Mesnage
E-mail(s) robinmes@gmail.com
Phone +447482206767
Organization name Kings College London
Street address Guy's Hospital, 8th Floor, Tower Wing
City London
ZIP/Postal code SE1 9RT
Country United Kingdom
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (50)
GSM3145178 Mesotrione_1mM (RM-Sample-10)
GSM3145179 Mesotrione_10uM (RM-Sample-11)
GSM3145180 Mesotrione_0.1uM (RM-Sample-12)
Relations
BioProject PRJNA471820
SRA SRP148096

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE114573_Mesnage_et_al._pesticides_HepaRG_FPKM_Data.txt.gz 26.8 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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