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Series GSE113985 Query DataSets for GSE113985
Status Public on Jun 26, 2019
Title Single-cell DNA replication profiling identifies spatiotemporal developmental dynamics of chromosome organization
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 31406346
Submission date May 02, 2018
Last update date Jun 23, 2020
Contact name Ichiro Hiratani
E-mail(s) ichiro.hiratani@riken.jp
Phone +81-78-306-3179
Organization name RIKEN
Department Center for Developmental Biology
Lab Laboratory for Developmental Epigenetics
Street address 2-2-3 Minatojima-minamimachi, Chuo-ku
City Kobe
State/province Hyogo
ZIP/Postal code 650-0047
Country Japan
 
Platforms (3)
GPL17131 Agilent-027411 SurePrint G3 Mouse CGH Microarray 4x180K (Probe Name version)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (960)
GSM3127755 CBMS1_rep1_d0_Undiff
GSM3127756 CBMS1_rep1_d2_EpiLC
GSM3127757 CBMS1_rep1_d3_EpiLC_EB_d1
This SuperSeries is composed of the following SubSeries:
GSE113981 Single-cell DNA replication profiling identifies spatiotemporal developmental dynamics of chromosome organization [HiC-seq]
GSE113983 Single-cell DNA replication profiling identifies spatiotemporal developmental dynamics of chromosome organization [RNA-seq]
GSE113984 Single-cell DNA replication profiling identifies spatiotemporal developmental dynamics of chromosome organization [BrdU-IP Repli-chip]
Relations
BioProject PRJNA454731

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE113985_RAW.tar 1.1 Gb (http)(custom) TAR (of BEDGRAPH, BIGWIG, TXT)
SRA Run SelectorHelp
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