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Series GSE113822 Query DataSets for GSE113822
Status Public on Jul 09, 2018
Title mRNA Seq of mouse tissues 9 weeks after RYGB or sham surgery [9 weeks]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In this study we sought to characterize the long tern response to RYGB surgery using diet induced obese mice. Controls were sham operated mice. Mice were age, sex, weight and diet matched.
 
Overall design diet induced obese male C57BL6 mice were subjected Roux en Y Gastric Bypass surgery or sham surgery. Both groups were then transferred to an elemental liquid diet and then gradually returned to high fat diet. Sham operated mice were weight matched by restriction of food. Mice were fasted overnight and sacrificed at 10am.
 
Contributor(s) Ben-Zvi D, Stylopoulos N
Citation Danny Ben-Zvi, Luca Meoli, Wasif M. Abidi, Eirini Nestoridi, Courtney Panciotti, Erick Castillo, Palmenia Pizarro, Eleanor Shirley, William F. Gourash, Christopher C. Thompson, Rodrigo Munoz, Clary B. Clish, Ron C. Anafi, Anita P. Courcoulas, and Nicholas Stylopoulos. Time-Dependent Molecular Responses Differ between Gastric Bypass and Dieting but Are Conserved Across Species. Cell Metabolism 2018. doi:10.1016/j.cmet.2018.06.004
Submission date Apr 28, 2018
Last update date Mar 19, 2019
Contact name Danny Ben-Zvi
E-mail(s) dannyb@ekmd.huji.ac.il
Phone 542772406
Organization name Hebrew University of Jerusalem
Street address Ein Kerem
City Jerusalem
State/province Israel
ZIP/Postal code 91120
Country Israel
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (51)
GSM3124703 Duodenum sham 9weeks 1
GSM3124704 Duodenum sham 9weeks 2
GSM3124705 Duodenum sham 9weeks 3
This SubSeries is part of SuperSeries:
GSE113823 Time-dependent molecular responses differ between gastric bypass and dieting but are conserved across species
Relations
BioProject PRJNA454676
SRA SRP144341

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE113822_Duodenum_63_processed.txt.gz 289.5 Kb (ftp)(http) TXT
GSE113822_Ileum_63_processed.txt.gz 283.1 Kb (ftp)(http) TXT
GSE113822_Jejunum_63_processed.txt.gz 290.6 Kb (ftp)(http) TXT
GSE113822_Liver_63_processed.txt.gz 268.9 Kb (ftp)(http) TXT
GSE113822_WAT_63_processed.txt.gz 341.4 Kb (ftp)(http) TXT
GSE113822_muscle_63_processed.txt.gz 283.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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