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Series GSE113368 Query DataSets for GSE113368
Status Public on Dec 25, 2018
Title Medial prefrontal cortex (mPFC) transcriptome analysis of Shank3-overexpressing mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Shank3 is a core excitatory postsynaptic protein expressed in multiple brain regions including the medial prefrontal cortex, striatum, and hippocampus. We have previously generated and characterized Shank3-overexpressing transgenic mice, and found that these mice exhibited manic-like behavioral phenotypes. To understand molecular mechanisms underlying the behavioral changes, we performed transcriptome (RNA-sequencing) analysis of the mPFC tissues from 10 to 12-week-old wild-type and Shank3 transgenic mice.
 
Overall design Medial prefrontal cortex (mPFC) transcriptome of 10 to 12-week-old wild-type and Shank3 transgenic (TG) mice.
 
Contributor(s) Han K, Chunmei J, Kang H
Citation(s) 30233305
Submission date Apr 19, 2018
Last update date Mar 19, 2019
Contact name Kihoon Han
E-mail(s) neurohan@korea.ac.kr
Organization name Korea University College of Medicine
Department Neuroscience
Street address 73, Inchon-ro, Seongbuk-gu
City Seoul
ZIP/Postal code 02841
Country South Korea
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM3104353 Shank3 transgenic_mPFC sample 1
GSM3104354 Shank3 transgenic_mPFC sample 2
GSM3104355 Shank3 transgenic_mPFC sample 3
Relations
BioProject PRJNA450933
SRA SRP141125

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE113368_processed_data_DESeq_count.txt.gz 843.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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