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| Status |
Public on Jan 25, 2019 |
| Title |
Expression data from Saccharomyces cerevisiae strains deleted for the nucleoporin Nup84 |
| Platform organisms |
Schizosaccharomyces pombe; Saccharomyces cerevisiae |
| Sample organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by array
|
| Summary |
the nuclear pore complex (NPC) is emerging as an important mediator of cellular processes beyond molecule transport, including control of gene expression, replication and DNA repair.
We used microarrays to study the global impact of Nup84 in gene expression, in particular expression of DNA repair genes.
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| |
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| Overall design |
S. cerevisiae strains were grown in YPD liquid culture, total RNA was isolated and hybridized on Affymetrix microarrays
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| |
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| Contributor(s) |
Santos-Pereira JM, Gaillard H, Aguilera A |
| Citation(s) |
30715474 |
| Submission date |
Apr 13, 2018 |
| Last update date |
Feb 06, 2019 |
| Contact name |
Andrés Aguilera |
| Organization name |
CABIMER, Universidad de Sevilla
|
| Department |
Genome BIology
|
| Lab |
Genome Instability & Cancer
|
| Street address |
Av. Américo Vespucio 24
|
| City |
Seville |
| ZIP/Postal code |
41092 |
| Country |
Spain |
| |
|
| Platforms (1) |
| GPL2529 |
[Yeast_2] Affymetrix Yeast Genome 2.0 Array |
|
| Samples (6)
|
| GSM3097158 |
WT, biological rep. 1 (nup84∆, control) |
| GSM3097159 |
WT, biological rep. 2 (nup84∆, control) |
| GSM3097160 |
WT, biological rep. 3 (nup84∆, control) |
|
| Relations |
| BioProject |
PRJNA450074 |
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