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GEO accession:
Series GSE112465
Query DataSets for GSE112465
Status
Public on Oct 30, 2018
Title
Isw2 and Ino80 chromatin remodeling factors regulate chromatin, replication, and copy number at the yeast ribosomal DNA locus
Organism
Saccharomyces cerevisiae
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
30355728
Submission date
Mar 28, 2018
Last update date
Mar 11, 2019
Contact name
Sam Cutler
E-mail(s)
scutler2@uw.edu
Phone
2032468681
Organization name
Fred Hutch Cancer Research Center
Department
Basic Sciences
Lab
Toshi Tsukiyama
Street address
1100 Fairview Ave N
City
Seattle
State/province
WA
ZIP/Postal code
98109
Country
USA
Platforms (1)
GPL17342
Illumina HiSeq 2500 (Saccharomyces cerevisiae)
Samples (63)
Less...
More...
GSM3069910
Isw2_YPD30_Isw2-A_1996_IP
GSM3069911
Isw2_YPD30_Isw2-A_1996_input
GSM3069912
Isw2_YPD30_Isw2-B_1997_IP
GSM3069913
Isw2_YPD30_Isw2-B_1997_input
GSM3069914
Nhp10_YPD30_Nhp10-A_3426_IP
GSM3069915
Nhp10_YPD30_Nhp10-A_3426_input
GSM3069916
Nhp10_YPD30_Nhp10-B_3427_IP
GSM3069917
Nhp10_YPD30_Nhp10-B_3427_input
GSM3069918
H3_YPD30_WT-A_166_IP
GSM3069919
H3_YPD30_WT-A_166_input
GSM3069920
H3_YPD30_WT-B_166_IP
GSM3069921
H3_YPD30_WT-B_166_input
GSM3069922
H3_YPD30_isw2-A_3320_IP
GSM3069923
H3_YPD30_isw2-A_3320_input
GSM3069924
H3_YPD30_isw2-B_6809_IP
GSM3069925
H3_YPD30_isw2-B_6809_input
GSM3069926
H3_YPD30_nhp10-A_3333_IP
GSM3069927
H3_YPD30_nhp10-A_3333_input
GSM3069928
H3_YPD30_nhp10-B_2060_IP
GSM3069929
H3_YPD30_nhp10-B_2060_input
GSM3069930
H3_YPD30_isw2nhp10-A_3337_IP
GSM3069931
H3_YPD30_isw2nhp10-A_3337_input
GSM3069932
H3_YPD30_isw2nhp10-B_2109_IP
GSM3069933
H3_YPD30_isw2nhp10-B_2109_input
GSM3069934
Pol-I_YPD30_WT_6679_IP
GSM3069935
Pol-I_YPD30_WT_6679_input
GSM3069936
Pol-I_YPD30_isw2nhp10_6673_IP
GSM3069937
Pol-I_YPD30_isw2nhp10_6673_input
GSM3069938
Pol-III_YPD30_WT_6686_IP
GSM3069939
Pol-III_YPD30_WT_6686_input
GSM3069940
Pol-III_YPD30_isw2nhp10_6693_IP
GSM3069941
Pol-III_YPD30_isw2nhp10_6693_input
GSM3069942
Pol2_YPD30_isw2-A_6917_IP
GSM3069943
Pol2_YPD30_isw2-A_6917_input
GSM3069944
Pol2_YPD30_isw2-B_6918_IP
GSM3069945
Pol2_YPD30_isw2-B_6918_input
GSM3069946
Pol2_YPD30_isw2nhp10-A_6921_IP
GSM3069947
Pol2_YPD30_isw2nhp10-A_6921_input
GSM3069948
Pol2_YPD30_isw2nhp10-B_6922_IP
GSM3069949
Pol2_YPD30_isw2nhp10-B_6922_input
GSM3069950
Pol2_YPD30_nhp10-A_6919_IP
GSM3069951
Pol2_YPD30_nhp10-A_6919_input
GSM3069952
Pol2_YPD30_nhp10-B_6920_IP
GSM3069953
Pol2_YPD30_nhp10-B_6920_input
GSM3069954
Pol2_YPD30_WT-A_6915_IP
GSM3069955
Pol2_YPD30_WT-A_6915_input
GSM3069956
Pol2_YPD30_WT-B_6916_IP
GSM3069957
Pol2_YPD30_WT-B_6916_input
GSM3069958
MNase_YPD23_isw2-A_3320_40U.sgr.gz
GSM3069959
MNase_YPD23_isw2nhp10-A_3337_40U.sgr.gz
GSM3069960
MNase_YPD23_isw2nhp10-C_2109_40U.sgr.gz
GSM3069961
MNase_YPD23_nhp10-A_3333_40U.sgr.gz
GSM3069962
MNase_YPD23_WT-A_166_40U.sgr.gz
GSM3069963
MNase_YPD30_isw2-B_3320_40U.sgr.gz
GSM3069964
MNase_YPD30_isw2nhp10-B_3337_20U.sgr.gz
GSM3069965
MNase_YPD30_isw2nhp10-B_3337_40U.sgr.gz
GSM3069966
MNase_YPD30_isw2nhp10-B_3337_80U.sgr.gz
GSM3069967
MNase_YPD30_isw2nhp10-D_2109_40U.sgr.gz
GSM3069968
MNase_YPD30_isw2nhp10-E_3337_40U.sgr.gz
GSM3069969
MNase_YPD30_nhp10-B_3333_40U.sgr.gz
GSM3069970
MNase_YPD30_WT-B_166_20U.sgr.gz
GSM3069971
MNase_YPD30_WT-B_166_40U.sgr.gz
GSM3069972
MNase_YPD30_WT-B_166_80U.sgr.gz
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE112423
Genome-wide maps of chromatin remodeling factors Isw2 and Ino80 in asynchronously growing yeast cells
GSE112424
Genome-wide maps of histone H3 in asynchronously growing yeast cells
GSE112425
Genome-wide maps of RNA Polymerase I and III in asynchronously growing yeast cells
GSE112426
Genome-wide maps of DNA Polymerase pausing in asynchronously growing yeast cells
GSE112427
Genome-wide maps of nucleosome positioning in asynchronously growing yeast cells
Relations
BioProject
PRJNA446650
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE112465_RAW.tar
2.6 Gb
(http)
(custom)
TAR (of SGR)
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