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Series GSE112066 Query DataSets for GSE112066
Status Public on Aug 30, 2018
Title Regulation of follicular T-helper cell positioning and function by PD-1
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Follicular T-helper (TFH) cells highly express the programmed cell death-1 (PD-1) molecule. Whereas inhibition of T cell receptor (TCR) signaling and CD28 co-stimulation is thought to be the primary mode of PD-1 functions, how PD-1 regulates TFH development and function remains unclear. Here we show that, when engaged by the ensemble of bystander B cells constitutively expressing PD-1 ligand 1 (PD-L1), PD-1 inhibits T-cell recruitment into follicles. This inhibition involves suppression of PI3K activities downstream of follicle-guidance receptor CXCR5, is independent from co-signaling with the TCR, and necessitates ICOS signaling to overcome. PD-1 further restricts CXCR3 upregulation on TFH cells, serving to concentrate these cells toward the GC territory, where PD-L1-PD-1 interactions between individual TFH and B cells optimize B-cell competition and affinity maturation. Therefore, operating in both costimulation-independent and -dependent manners, PD-1 plays an integral role in orchestrating tissue positioning and function of TFH cells.
 
Overall design Differential expression analysis between WT and Pdcd1KI/KI CXCR5hi Tfh cells
 
Contributor(s) Qi H, Shi J, Hou S, Fang Q, Liu X, Liu X
Citation(s) 30076099
Submission date Mar 20, 2018
Last update date Mar 21, 2019
Contact name Hai Qi
E-mail(s) qihai@mail.tsinghua.edu.cn
Organization name Tsinghua University
Department School of Medicine
Lab Laboratory of Dynamic Immunobiology
Street address Tsinghuayuan Street
City Beijing
State/province Beijing
ZIP/Postal code 100084
Country China
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM3056938 WT-1-1
GSM3056939 WT-1-2
GSM3056940 WT-1-3
Relations
BioProject PRJNA439209
SRA SRP136067

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112066_PD1_KI_vs_WT_TFH_count.txt.gz 261.3 Kb (ftp)(http) TXT
GSE112066_PD1_KI_vs_WT_TFH_fpkm.txt.gz 609.4 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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