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Series GSE112008 Query DataSets for GSE112008
Status Public on Jul 14, 2018
Title Med23 serves as a gatekeeper of the myeloid potential of hematopoietic stem cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In response to myeloablative stresses, HSCs are rapidly activated to replenish myeloid progenitors, while maintaining full potential of self-renewal to ensure life-long hematopoiesis. However, the key factors that orchestrate HSC activities during physiological stresses remain largely unknown. Here we report that Med23 controls the myeloid potential of activated HSCs. Ablation of Med23 in hematopoietic system leads to lymphocytopenia. Med23- deficient HSCs undergo myeloid-biased differentiation and lose the self-renewal capacity. Interestingly, Med23-deficient HSCs are much easier to be activated in response to physio- logical stresses. Mechanistically, Med23 plays essential roles in maintaining stemness genes expression and suppressing myeloid lineage genes expression. Med23 is downregulated in HSCs and Med23 deletion results in better survival under myeloablative stress. Altogether, our findings identify Med23 as a gatekeeper of myeloid potential of HSCs, thus providing unique insights into the relationship among Med23-mediated transcriptional regulations, the myeloid potential of HSCs and HSC activation upon stresses.
 
Overall design Hematopoietic stem cells in the bone marrow were isolated from WT or Med23-dificient adult mice, and were subjected to scRNA-seq.
 
Contributor(s) Chen X, Zhao J, Gu C, Guo F, Liu X
Citation(s) 30218073
Submission date Mar 19, 2018
Last update date Oct 28, 2021
Contact name Fan Guo
E-mail(s) guofan@ioz.ac.cn
Organization name Institute of Zoology, Chinese Academy of Sciences
Department The State Key Laboratory of Stem Cell and Reproductive Biology
Lab Group of Reproductive Epigenetics
Street address 1 Beichen West Road, Chaoyang District
City Beijing
State/province Beijing
ZIP/Postal code 100101
Country China
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (8)
GSM3052839 WT_scRNA_batch1
GSM3052840 WT_scRNA_batch2
GSM3052841 WT_scRNA_batch3
Relations
BioProject PRJNA438937
SRA SRP135991

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112008_Barcode_UMI_info.xlsx 10.7 Kb (ftp)(http) XLSX
GSE112008_hsc_exprs.txt.gz 15.4 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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