|
| Status |
Public on Dec 31, 2020 |
| Title |
Hepatic RNA expression profile analysis of antibiotics treated and untreated Clonorchis sinensis-infected mice |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Study whether IL-33 participates in the cholangiopathies during C. sinensis infection,and whether the gut microbiota participates in the pathogenesis of clonorchiasis
|
| |
|
| Overall design |
we performed transcriptional profiling analysis by RNA sequencing of liver RNA isolated from antibiotics treated and untreated 35 days post C. sinensis-infected WT and IL-33-/- mice,in quadruplicate,using Illumina HiSeq X-TEN
|
| |
|
| Contributor(s) |
Wang Y, Zhang B |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Mar 19, 2018 |
| Last update date |
Jan 02, 2021 |
| Contact name |
Bo Zhang |
| E-mail(s) |
zh1262179198@163.com
|
| Organization name |
Xuzhou Medical University
|
| Department |
Jiangsu Key Laboratory of Immunity and Metabolism
|
| Street address |
209 tongshan road, yunlong district.
|
| City |
Xuzhou |
| State/province |
Jiangsu Province |
| ZIP/Postal code |
221004 |
| Country |
China |
| |
|
| Platforms (1) |
|
| Samples (15)
|
| GSM3052667 |
IL-33KO Clonorchis sinensis-infected rep1 |
| GSM3052669 |
IL-33KO Clonorchis sinensis-infected rep2 |
| GSM3052670 |
IL-33KO Clonorchis sinensis-infected rep3 |
| GSM3052671 |
IL-33KO Clonorchis sinensis-infected + antibiotics rep1 |
| GSM3052673 |
IL-33KO Clonorchis sinensis-infected + antibiotics rep2 |
| GSM3052674 |
IL-33KO Clonorchis sinensis-infected + antibiotics rep3 |
| GSM3052676 |
IL-33KO Clonorchis sinensis-infected + antibiotics rep4 |
| GSM3052677 |
WT Clonorchis sinensis-infected rep1 |
| GSM3052678 |
WT Clonorchis sinensis-infected rep2 |
| GSM3052680 |
WT Clonorchis sinensis-infected rep3 |
| GSM3052681 |
WT Clonorchis sinensis-infected rep4 |
| GSM3052683 |
WT Clonorchis sinensis-infected + antibiotics rep1 |
| GSM3052685 |
WT Clonorchis sinensis-infected + antibiotics rep2 |
| GSM3052686 |
WT Clonorchis sinensis-infected + antibiotics rep3 |
| GSM3052688 |
WT Clonorchis sinensis-infected + antibiotics rep4 |
|
| Relations |
| BioProject |
PRJNA438925 |
| SRA |
SRP135984 |
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