|
| Status |
Public on Mar 14, 2023 |
| Title |
Transcriptome analysis of cells in mouse hairy melanocytic nevi |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq data was obtained from different skin cell types at two time points: postnatal day P30, when WT dorsal hair follicles are in actively growing state (aka anagen) and P56, when WT hair follicles are in resting state (aka telogen). Cell types include: Bulge stem cells (B), dermal papilla fibroblasts (DP), secondary hair germ cells (HG), melanocytes (Melan), myeloid cells (Myel) and CD45-positive immune cells (I). All cell were FACS sorted and only live single cells were collected for RNA extraction.
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| |
|
| Overall design |
Whole transcriptome profiling of different skin and hair follicle cell types in normal versus hairy nevus mouse model skin
|
| |
|
| Contributor(s) |
Wang X, Plikus M |
| Citation(s) |
37344645 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 AR067273 |
Induction of fat regeneration in skin wounds by hair follicle signaling |
The Regents of the University of California |
Maksim V Plikus |
|
| |
| Submission date |
Mar 19, 2018 |
| Last update date |
Jun 23, 2023 |
| Contact name |
Maksim V Plikus |
| E-mail(s) |
plikus@uci.edu
|
| Phone |
949-824-1260
|
| Organization name |
University of California, Irvine
|
| Department |
Developmental and Cell Biology
|
| Street address |
845 Health Sciences Road
|
| City |
Irvine |
| State/province |
California |
| ZIP/Postal code |
92697 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (38)
|
|
| Relations |
| BioProject |
PRJNA438931 |
| SRA |
SRP135988 |
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