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Series GSE111778 Query DataSets for GSE111778
Status Public on Oct 18, 2018
Title Comparing the effects of low protein, high carbohydrate diets and caloric restriction on brain aging in mice.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Calorie restriction (CR) increases lifespan and improves brain health in mice. Ad libitum low protein, high carbohydrate (LPHC) diets also extend lifespan, but it is not known whether they are beneficial for brain health. We compared hippocampus biology and memory in mice subjected to 20% CR or provided ad libitum access to one of three LPHC diets, or to a control diet. At age 15 months, patterns of RNA expression in the hippocampus were similar between CR and LPHC diets for genes associated with longevity, cytokines and dendrite morphogenesis. Nutrient sensing proteins including SIRT1, mTOR and PGC1α were also influenced by diet, however the effects varied by sex. CR and LPHC diets were associated with increased dendritic spines in dentate gyrus neurons. CR and LPHC diets led to modest improvements in the Barnes Maze and Novel Object Recognition. LPHC diets recapitulate some of the benefits of CR on brain aging.
 
Overall design 30 samples, 6 biological replicates in each group.
 
Contributor(s) Wahl D
Citation(s) 30463018
Submission date Mar 13, 2018
Last update date Mar 21, 2019
Contact name Devin Wahl
E-mail(s) devin.wahl@colostate.edu
Phone 7193545259
Organization name Colorado State University
Street address 1582 Campus Delivery, Moby Reception
City Fort Collins
State/province Colorado
ZIP/Postal code 80523
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (30)
GSM3039611 Chow 1.3
GSM3039612 Chow 2.3
GSM3039613 Chow 25.3
Relations
BioProject PRJNA438123
SRA SRP135283

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE111778_FPKM.xlsx 9.7 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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