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| Status |
Public on Dec 17, 2019 |
| Title |
Time-course transcriptomic analysis of Arabidopsis response to high light stress |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Analysis of transcriptome profile response to short-, middle- and long-term high light stress, as well as the transcriptome profile of recovery from high light stress.
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| |
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| Overall design |
Total RNA samples were isolated from 7-day old whole seedlings with or without high light treatment for 0.5h, 6h, 12h, 24h, 48h and 72h. Recovery samples were collected after 14 h recovery in growth light condition following 72 h high light treatment. Each time course has duplicates. mRNA expression profiles were generated by deep sequencing using Illumina HiSeq 2500.
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| |
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| Contributor(s) |
Huang J, Zhao X, Chory J |
| Citation(s) |
31851942 |
| |
| Submission date |
Feb 23, 2018 |
| Last update date |
Feb 24, 2020 |
| Contact name |
Joanne Chory |
| E-mail(s) |
chory@salk.edu
|
| Organization name |
Salk Institute for Biological Studies
|
| Department |
Plant Biology Laboratory
|
| Lab |
PBIO-C
|
| Street address |
10010 N Torrey Pines Rd
|
| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92037 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL17639 |
Illumina HiSeq 2500 (Arabidopsis thaliana) |
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| Samples (26)
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| Relations |
| BioProject |
PRJNA435737 |
| SRA |
SRP133385 |
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