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| Status |
Public on Jun 23, 2008 |
| Title |
TEV-Arabidopsis pathosystem |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
Transcription profiling of Arabidopsis plants infected with the Tobacco etch potyvirus TEV and the evolved TEV-At17, which was generated by serial passes of ancestral TEV in Arabidopsis. Infection with TEV-At17 cause severe symptoms in the plant, compared with the asymptomatic TEV-infection.
Keywords: Virus infection
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| Overall design |
Five replicates for each sample category (Arabidopsis Ler infected with mock, or with TEV and TEV-At17 viruses) were generated, and compared with a global reference, generated from an equimolar mix of amplified RNAs from each of the 15 plants. Three replicas (#1,2, and 3) in each group were labeled with Cy5 and compared with Cy3-labeled reference mix, while the other two replicas (#4 and 5) were reversed-labeled.
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| Contributor(s) |
Carbonell P, Agudelo-Romero P, Elena SF, Perez-Amador MA |
| Citation(s) |
18545680, 18684336 |
| |
| Submission date |
Apr 07, 2008 |
| Last update date |
Jan 29, 2013 |
| Contact name |
Miguel Perez-Amador |
| E-mail(s) |
mpereza@ibmcp.upv.es
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| Phone |
34-963877872
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| Fax |
34-963877859
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| Organization name |
Inst. Biologia Molecular y Celular de Plantas (IBMCP-CSIC)
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| Street address |
Avda. de los Naranjos s/n
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| City |
Valencia |
| State/province |
Valencia |
| ZIP/Postal code |
46022 |
| Country |
Spain |
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| Platforms (1) |
| GPL2508 |
Galbraith Laboratory Operon Long Oligonucleotide Microarray version 3.0 (ATv302.02.Z) |
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| Samples (15)
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| Relations |
| BioProject |
PRJNA106961 |
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