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Series GSE110749 Query DataSets for GSE110749
Status Public on Apr 21, 2018
Title Dimethyl itaconate inhibits secondary wave of NF-κB signaling in macrophage activation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Natural metabolite itaconate and its membrane permeable derivative dimethyl itaconate (DI) selectively inhibit a subset of cytokines during macrophage activation (e.g. IL-1β, IL-6, IL-12 but not TNF-α). Selectivity of DI action stems from the inhibitory effects of secondary, but not primary, wave of NF-κB signaling.
 
Overall design Bone marrow-derived macrophages (BMDMs) from C57BL/6 mice were stimulated with LPS + IFNg for indicated timepoints. Some samples were treated with dimethyl itaconate for 12h prior to LPS stimulation.
 
Contributor(s) Bambouskova M, Lampropoulou V, Sergushichev A, Artyomov MN
Citation(s) 29670287
Submission date Feb 16, 2018
Last update date Mar 21, 2019
Contact name Maxim N. Artyomov
E-mail(s) martyomov@pathology.wustl.edu
Organization name Washington University in St.Louis
Department Immunology&Pathology
Street address 660 S. Euclid Avenue, Campus Box 8118
City St.Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (20)
GSM3015930 Ctrl_0hrs_rep1
GSM3015931 Ctrl_0hrs_rep2
GSM3015932 Ctrl_1hrs_rep1
Relations
BioProject PRJNA434457
SRA SRP133013

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110749_counts.txt.gz 419.1 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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