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Series GSE110672 Query DataSets for GSE110672
Status Public on Mar 01, 2018
Title Glucagon contributes to liver zonation in mice [Gcg KO]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Liver zonation characterizes the separation of metabolic pathways along the lobules and is required for optimal function. Wnt/beta-catenin signaling controls metabolic zonation by activating genes in the perivenous hepatocytes, while suppressing genes in the periportal counterparts. We now demonstrate that glucagon opposes the actions of Wnt/beta-catenin signaling on gene expression and metabolic zonation pattern. The effects were more pronounced in the periportal hepatocytes where 28% of all genes were activated by glucagon and inhibited by Wnt/beta-catenin. The glucagon and Wnt/beta-catenin receptors and their signaling pathways are uniformly distributed in periportal and perivenous hepatocytes and the expression is not regulated by the opposing signal. Collectively, our results show that glucagon controls gene expression and metabolic zonation in the liver through a counter play with the Wnt/beta-catenin signaling pathway.
 
Overall design Gene expression profiling of Gcg-/- and wild type mice in liver
 
Contributor(s) Cheng X, Xin Y, Gromada J
Citation(s) 29555772
Submission date Feb 15, 2018
Last update date Mar 21, 2019
Contact name Yurong Xin
E-mail(s) yurong.xin@regeneron.com
Organization name Regeneron Pharmaceuticals, Inc.
Street address 777 Old Saw Mill River Road
City Tarrytown
State/province NY
ZIP/Postal code 10598
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM3005257 liver_zonation_1_WT
GSM3005258 liver_zonation_2_WT
GSM3005259 liver_zonation_3_WT
This SubSeries is part of SuperSeries:
GSE110674 Glucagon contributes to liver zonation in mice
Relations
BioProject PRJNA434234
SRA SRP132927

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110672_Gcg_KO_gene_rpkm.txt.gz 774.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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