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Series GSE110608 Query DataSets for GSE110608
Status Public on Aug 13, 2018
Title RNA sequencing analysis of human embryonic stem cells and axial progenitors
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We analysed the transcriptomes of human embryonic stem cells (hESCs) and in vitro derived axial progenitors.
 
Overall design RNA sequencing of triplicate samples of undifferentiated hESCs grown in Essential 8 medium and Geltrex and axial progenitors generated after a 3 day culture of hPSCs on fibronectin in the presence of bFGF (20 ng/ml) and the WNT agonist/GSK3 inhibitor CHIR99021
 
Contributor(s) Granata I, Tsakiridis A
Citation(s) 30095409
Submission date Feb 14, 2018
Last update date Mar 27, 2019
Contact name Ilaria Granata
E-mail(s) ilaria.granata@icar.cnr.it
Organization name National Research Council of Italy (CNR)
Department Institute for high performance computing and networking (ICAR)
Street address Via Pietro Catellino, 111
City Napoli
ZIP/Postal code 80131
Country Italy
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM3004127 hESCs rep1
GSM3004128 hESCs rep2
GSM3004129 hESCs rep3
Relations
BioProject PRJNA434099
SRA SRP132867

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110608_normalized_counts_matrix.txt.gz 1.4 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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