|
| Status |
Public on Dec 03, 2018 |
| Title |
Gene expression analysis of dengue-infected cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We use RNA-seq on mRNA to identify genes that are differential expressed in human cells following dengue virus infection
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| |
|
| Overall design |
mRNA from mock- and dengue-infected cells was purified and subjected to RNA-seq analysis. For dengue-infected cells, a MOI of 3 was used to ensure near 100% infection rate.
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| |
|
| Contributor(s) |
Shah PS, Krogan NJ |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Feb 12, 2018 |
| Last update date |
Mar 21, 2019 |
| Contact name |
Nevan J Krogan |
| E-mail(s) |
nevan.krogan@ucsf.edu
|
| Organization name |
University of California, San Francisco
|
| Street address |
1700 4th Street, 308 Byers Hall, Box 2530
|
| City |
San Francisco |
| State/province |
CA California |
| ZIP/Postal code |
94158 -2530 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
|
| Samples (6)
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|
| Relations |
| BioProject |
PRJNA433885 |
| SRA |
SRP132737 |
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