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Series GSE110391 Query DataSets for GSE110391
Status Public on Feb 09, 2018
Title The protective effect of celastrol in ANIT-induced cholestasis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: The goals of this study was to (1) evaluate the protective effect of celastrol on alpha-naphthylisothiocyanate (ANIT)-induced cholestasis and (2) which genes were recovered by celastrol.
Methods:To investigate the protective effect of celastrol on ANIT-induced cholestasis, the WT mice were randomly assigned into two groups, respectively (n=3): (1) ANIT; (2) ANIT+Celastrol. ANIT+Celastrol group was orally treated with celastrol (10 mg/kg dissolved in 1% DMSO + 2% Tween 80 + 97% water) for 5 consecutive days. After celastrol was treated for 3 days, ANIT and ANIT+Celastrol groups were given a single oral dose of ANIT. All mice were killed 48 h after ANIT administration. Liver samples were harvested and frozen at -80 °C before analysis.
Results: A total of 978 DEGs were identified. Large numbers of these DEGs were related to activation of SIRT1, which included increased FXR signaling and inhibition of PPARγ, nuclear factor-kappa B (NF-κB), and P53 signaling.
Conclusions: Celastrol could protect ANIT-induced cholestasis by recovering disrupted Sirt1 level.
 
Overall design 6 hepatic mRNA profiles were generated by deep sequencing, in triplicate, using Illumina GAIIx.
 
Contributor(s) Zhao Q, Li F
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Feb 08, 2018
Last update date Mar 19, 2019
Contact name Qi Zhao
E-mail(s) zhaoqi1@mail.kib.ac.cn
Phone 13529147951
Organization name Kunming Institute of Botany, Chinese Academy of Sciences
Street address State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China
City 云南
ZIP/Postal code 650201
Country China
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM2990586 ANIT1
GSM2990587 ANIT2
GSM2990588 ANIT3
Relations
BioProject PRJNA433590
SRA SRP132536

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110391_RAW.tar 590.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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