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Series GSE110144 Query DataSets for GSE110144
Status Public on Dec 26, 2018
Title T cells activated in the presence or absence of TLR agonists
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report the gene expression differences between OT-1 T cells activated alone or in the presence of TLR1/2 (Pam3CSK4) or TLR7 (Gardiquimod). By activating OT-1 splenocytes in the presence or absence of the TLR agonists, isolating RNA from purified CD8+ T cells we show that cells activated in the presence of either TLR1/2 or TLR7 agonists had similar transcriptional profiles demonstrating an increase in Th1 cytokine expression over cells that were activated alone. This study provides a key piece of information for those designing T cell mediated therapies.
 
Overall design Examintation of T cells activated in the presnece or absence of TLR agonists
 
Contributor(s) McIlwain SJ, McNeel DG, Zahm CD, Ong IM
Citation(s) 30201735
Submission date Feb 05, 2018
Last update date Mar 21, 2019
Contact name Douglas McNeel
E-mail(s) dm3@medicine.wisc.edu
Phone (608) 263-4198
Organization name University of Wisconsin
Street address 111 Highland Ave., Rm 7007
City Madison
State/province Wisconsin
ZIP/Postal code 53704
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (24)
GSM2978490 OVA_24h Rep1
GSM2978491 OVA_24h Rep2
GSM2978492 OVA_24h Rep3
Relations
BioProject PRJNA432950
SRA SRP132195

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110144_RAW.tar 8.8 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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