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Series GSE109844 Query DataSets for GSE109844
Status Public on Nov 14, 2018
Title The expression profiles of CD4low(HLA-G+) T cells
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The aim of the dataset was to demonstrate that CD4low T cells were murine homolog of CD4lowHLA-G+ T cells by comparing the expression profiles of CD4lowHLA-G+ T cells in prostate cancer (PCa) patients to those of CD4low T cells in PCa mouse models.
 
Overall design mRNA profiles of CD4lowHLA-G+ T cells isolated from PCa patients with androgen deprivation therapy (ADT) and naïve CD4+ T cells derived from healthy donors (HD) as controls were generated by deep sequencing, in duplicate, using Illumina HiSeq X Tten. mRNA of CD4low T cells isolated from castrated TRAMP mice and naive CD4+ T cells derived from wild-type mice as controls were sequenced, in duplicate,using Illumina HiSeq X Tten.To determine whether CD4low T cells were murine homolog of CD4lowHLA-G+ T cells,the expression profiles of CD4lowHLA-G+ T cells and CD4low T cells were compared.
 
Contributor(s) Wang C, Zhang Y, Gao WQ
Citation(s) 30297869
Submission date Jan 30, 2018
Last update date Mar 20, 2019
Contact name Chao Wang
E-mail(s) tedwang@sjtu.edu.cn
Organization name Shanghai Jiao Tong University
Street address 1954HuaShan road
City ShangHai
ZIP/Postal code 200030
Country China
 
Platforms (2)
GPL20795 HiSeq X Ten (Homo sapiens)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (8)
GSM2971197 human naïve CD4 rep1
GSM2971198 human naïve CD4 rep2
GSM2971199 CD4lowHLA-G+ T cells rep1
Relations
BioProject PRJNA432170
SRA SRP131776

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE109844_CD4lowHLA-G_vs_human_N_CD4.xls.gz 780.6 Kb (ftp)(http) XLS
GSE109844_CD4lowHLA-G_vs_human_N_CD4_diff.xls.gz 1.5 Mb (ftp)(http) XLS
GSE109844_CD4low_vs_murine_N_CD4.xls.gz 699.3 Kb (ftp)(http) XLS
GSE109844_CD4low_vs_murine_N_CD4_diff.xls.gz 1.2 Mb (ftp)(http) XLS
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Raw data are available in SRA
Processed data are available on Series record

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