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| Status |
Public on Apr 09, 2018 |
| Title |
Transcriptomic profile of the retinal ganglion cell type J-RGC in Tbr1 KO and control mice |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The goal of this experiment is to identify genes with altered expression in Tbr1 mutant J-RGCs.
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| |
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| Overall design |
J-RGCs were labeled with Green Fluorescent Protein using a J-RGC specific transgenic line and isolated by flow cytometry. 5 samples from 4 control animals (JRGC_WT_2 and JRGC_WT_3 are from the same animal) and 6 samples from 4 mutant animals (JRGC_KO_1 and JRGC_KO_2 are from the same animal, JRGC_KO_3 and JRGC_KO_4 are from the same animal) were collected. RNA was extracted and libraries prepared for Illumina sequencing.
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| |
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| Contributor(s) |
Liu J, Sanes JR |
| Citation(s) |
29632360 |
| |
| Submission date |
Jan 04, 2018 |
| Last update date |
Feb 13, 2020 |
| Contact name |
Jinyue Liu |
| E-mail(s) |
liu_jinyue@gis.a-star.edu.sg
|
| Organization name |
Genome Institute of Singapore
|
| Street address |
60 Biopolis Street
|
| City |
Singapore |
| ZIP/Postal code |
138672 |
| Country |
Singapore |
| |
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| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
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| Samples (11)
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| Relations |
| BioProject |
PRJNA428533 |
| SRA |
SRP128068 |
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