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Series GSE108096 Query DataSets for GSE108096
Status Public on Feb 15, 2018
Title Hepatic loss of Lis1 leads to fatty liver and predisposes to tumorigenesis in mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We found that genetic deletion of Lis1 (also known as Pafah1b1) in mouse liver led to increased lipid accumulation and inflammation in the liver. Further analysis revealed that loss of Lis1 led to endoplasmic reticulum (ER) stress and reduced triglyceride secretion. Attenuation of ER stress by tauroursodeoxycholic acid (TUDCA) diminished lipid accumulation in the Lis1 defecient hepatocytes. In addition, Golgi was disorganized in Lis1 deficient livers. These mutants exhibited increased hepatocyte ploidy and accelerated development of liver cancer when treated with DEN. Taken together, these findings suggest that Lis1 is involved in the development and progression of liver diseases from steatosis to liver cancer and provide a useful model for delineating the molecular pathways that lead to these diseases.
 
Overall design Gene expression in 4 control livers (CT) and 4 Lis1 knockout livers (KO) at 2 months was analyzed by RNA-Seq.
 
Contributor(s) Li X, Song H
Citation(s) 29475944
Submission date Dec 14, 2017
Last update date Mar 21, 2019
Contact name Xiaoling Li
E-mail(s) lxling@zju.edu.cn
Phone +86-571-88208368
Organization name Zhejiang University
Department Life Sciences Institute
Lab Hai Song Lab
Street address 866
City hangzhou
State/province Zhejiang
ZIP/Postal code 310058
Country China
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (8)
GSM2889472 CT1
GSM2889473 CT2
GSM2889474 CT3
Relations
BioProject PRJNA422444
SRA SRP126777

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108096_CT_KO_reads_counts.txt.gz 274.8 Kb (ftp)(http) TXT
GSE108096_CT_KO_rpkm.txt.gz 684.4 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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