|
| Status |
Public on Dec 14, 2017 |
| Title |
The genome-scale DNA-binding of FadR transcription factor in Sulfolobus acidocaldarius |
| Organism |
Sulfolobus acidocaldarius DSM 639 |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This is ChIPseq result of FadR (Saci_1107), which is the only TetR family regulator presented in Sulfolobus acidocaldarius. The aim of the study is to gain insights into the function of TetR regulator by analyzing its whole genome binding sites.
|
| |
|
| Overall design |
genome-scale binding site identification with output and mock samples as control
|
| |
|
| Contributor(s) |
Wang K |
| Citation(s) |
30948713 |
| |
| Submission date |
Dec 13, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
kun wang |
| Organization name |
Stockholms Universitet
|
| Department |
Department of Molecular Biosciences, The Wenner-Gren Institute
|
| Street address |
Svante Arrhenius väg 20C
|
| City |
Stockholm |
| ZIP/Postal code |
10691 |
| Country |
Sweden |
| |
|
| Platforms (1) |
| GPL24388 |
Illumina MiSeq (Sulfolobus acidocaldarius DSM 639) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA422271 |
| SRA |
SRP126671 |
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