|
| Status |
Public on Dec 27, 2018 |
| Title |
Expression data from Wild-type (WT) and Astrocyte elevated gene-1 (AEG-1) knockout (KO) bone marrow derived macrophages (BMDM) |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
AEG-1 is overexpressed in human hepatocellular carcinoma (HCC) and positively regulates inflammation and development and progression of HCC. An AEG-1KO mouse was generated to understand the function of AEG-1 in inflammatory processes in HCC.
|
| |
|
| Overall design |
BMDMs were isolated from WT and AEG-1KO mice for RNA extraction and RNA-sequencing.
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| |
|
| Contributor(s) |
Sarkar D, Dozmorov M |
| Citation(s) |
30181179 |
| |
| Submission date |
Dec 05, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Mikhail Dozmorov |
| E-mail(s) |
mdozmorov@vcu.edu
|
| Organization name |
Virginia Commonwealth University
|
| Department |
Biostatistics
|
| Street address |
830 E Main St
|
| City |
Richmond |
| State/province |
VA |
| ZIP/Postal code |
23298 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL21493 |
Illumina HiSeq 3000 (Mus musculus) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA421088 |
| SRA |
SRP126140 |
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