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Series GSE107086 Query DataSets for GSE107086
Status Public on Jun 15, 2019
Title Endogenous glucocorticoid rhythms regulate the circadian sensitivity to noise
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The cochlea possesses a robust circadian clock machinery that regulates auditory function. How the cochlear clock is influenced by the circadian system remains unknown. Here we show that cochlear rhythms are system-driven and require local Bmal1 as well as central input from the suprachiasmatic nuclei (SCN). SCN ablations disrupted the circadian expression of the core clock genes in the cochlea. Since the circadian secretion of glucocorticoids (GCs) is controlled by the SCN and that GCs are known to modulate auditory function, we assessed their influence on circadian gene expression. Removal of circulating GCs by adrenalectomy (ADX) did not have a major impact on core clock gene expression in the cochlea. Rather it abolished the transcription of clock-controlled genes involved in inflammation. ADX abolished the known differential auditory sensitivity to day and night noise trauma and prevented the induction of GABA-ergic and glutamate receptors mRNA transcripts. However, these improvements were unrelated to changes at the synaptic level suggesting other cochlear functions may be involved. Due to this circadian regulation of noise sensitivity by GCs, we evaluated the actions of the synthetic glucocorticoid dexamethasone (DEX) at different times of the day. DEX was effective in protecting from acute noise trauma only when administered during daytime, when circulating glucocorticoids are low, indicating that chronopharmacological approaches are important for obtaining optimal treatment strategies for hearing loss. GCs appear as a major regulator of the differential sensitivity to day or night noise trauma, a mechanism likely involving the circadian control of inflammatory responses.
 
Overall design To explore the influence of GCs on time-dependent auditory function, we exposed animals to noise (6-12 kHz, 100 dB SPL for 1 h) during daytime (ZT3)  or nighttime (ZT15). on whole cochleae collected 2 hours post-day or night noise trauma
 
Contributor(s) Cederroth CR, Park J, Basinou V, Weger BD, Tserga E, Sarlus H, Magnusson AK, Kadri N, Gachon F, Canlon B
Citation(s) 31353184
Submission date Nov 17, 2017
Last update date Jul 12, 2022
Contact name Benjamin D Weger
Organization name EPFL
Department SV
Lab Naef Lab
Street address Station 15
City Lausanne
State/province VD
ZIP/Postal code 76344
Country Germany
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (24)
GSM2861064 Day Noise ADX sample a
GSM2861065 Day Noise ADX sample b
GSM2861066 Day Noise ADX sample c
This SubSeries is part of SuperSeries:
GSE107087 Circadian regulation of cochlear sensitivity to noise by circulating glucocorticoids
Relations
BioProject PRJNA418971
SRA SRP125225

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE107086_raw_counts.csv.gz 832.3 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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