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| Status |
Public on Mar 06, 2018 |
| Title |
Temporal epigenomic profiles of transition from hematopoietic multipotent progenitors to B committed cells [ChIP-seq] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
To identify the “time-lapse” TF networks during B lineage commitment, we established multipotent progenitors harboring a tamoxifen-inducible form of Id3, an in vitro system where virtually all cells became B cells within 6 days by simply withdrawing 4-OHT. In this study, epigenomic analysis at multiple time points was performed using the culture system.
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| Overall design |
Time-course epigenomic profiles of multipotent iLS cells toward B committed cells were analyzed by deep sequencing using Illumina Hiseq platform.
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| Contributor(s) |
Miyai T, Endo TA, Ikawa T |
| Citation(s) |
29440259 |
| |
| Submission date |
Nov 13, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Takaho A. Endo |
| E-mail(s) |
takaho.endo@riken.jp
|
| Organization name |
RIKEN
|
| Department |
IMS
|
| Lab |
Laboratory for Integrative Genomics
|
| Street address |
1-7-22 Suehiro, Tsurumi
|
| City |
Yokohama |
| State/province |
Kanagawa |
| ZIP/Postal code |
230-0045 |
| Country |
Japan |
| |
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| Platforms (1) |
| GPL18480 |
Illumina HiSeq 1500 (Mus musculus) |
|
| Samples (24)
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| This SubSeries is part of SuperSeries: |
| GSE106795 |
Temporal transcriptomic and epigenomic profiles of transition from hematopoietic multipotent progenitors to B committed cells |
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| Relations |
| BioProject |
PRJNA418088 |
| SRA |
SRP124822 |
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