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Series GSE106794 Query DataSets for GSE106794
Status Public on Mar 06, 2018
Title Temporal epigenomic profiles of transition from hematopoietic multipotent progenitors to B committed cells [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To identify the “time-lapse” TF networks during B lineage commitment, we established multipotent progenitors harboring a tamoxifen-inducible form of Id3, an in vitro system where virtually all cells became B cells within 6 days by simply withdrawing 4-OHT. In this study, epigenomic analysis at multiple time points was performed using the culture system.
Overall design Time-course epigenomic profiles of multipotent iLS cells toward B committed cells were analyzed by deep sequencing using Illumina Hiseq platform.
Contributor(s) Miyai T, Endo TA, Ikawa T
Citation(s) 29440259
Submission date Nov 13, 2017
Last update date May 15, 2019
Contact name Takaho A. Endo
Organization name RIKEN
Department IMS
Lab Laboratory for Integrative Genomics
Street address 1-7-22 Suehiro, Tsurumi
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (24)
GSM2850410 H3K4me3 day0 rep1
GSM2850411 H3K4me3 day5 rep1
GSM2850412 H3K4me3 day12 rep1
This SubSeries is part of SuperSeries:
GSE106795 Temporal transcriptomic and epigenomic profiles of transition from hematopoietic multipotent progenitors to B committed cells
BioProject PRJNA418088
SRA SRP124822

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE106794_RAW.tar 190.9 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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